Information for motif11


Reverse Opposite:

p-value:1e-92
log p-value:-2.126e+02
Information Content per bp:1.756
Number of Target Sequences with motif317.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif93.2
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets100.9 +/- 54.2bp
Average Position of motif in Background80.2 +/- 56.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GGGANTTGTAGT
GGGAATTGTAGT

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.81
Offset:-7
Orientation:reverse strand
Alignment:-------GGGANTTGTAGT-
GCATTCTGGGAATTGTAGTT

MA0511.1_RUNX2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GGGANTTGTAGT---
GGGGTTTGTGGTTTG

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGGANTTGTAGT---
---NNHTGTGGTTWN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGGANTTGTAGT
TGGGGA--------

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGGANTTGTAGT----
GNNATTTGTCGTAANN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGANTTGTAGT------
-NNNANTGCAGTGCNNTT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGGANTTGTAGT---
-----CTGTGGTTTN

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GGGANTTGTAGT--
----GCTGTGGTTT

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGGANTTGTAGT
AGAGGAAGTG----