Information for motif15


Reverse Opposite:

p-value:1e-72
log p-value:-1.674e+02
Information Content per bp:1.899
Number of Target Sequences with motif3403.0
Percentage of Target Sequences with motif15.08%
Number of Background Sequences with motif3019.8
Percentage of Background Sequences with motif11.12%
Average Position of motif in Targets99.0 +/- 56.0bp
Average Position of motif in Background101.4 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCCTACTG-----
TNTCCTGCTGTGNNG

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TCCTACTG-----
NNTCCTGCTGTGNNN

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCCTACTG-----
TCNCCTGCTGNGNNN

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCCTACTG--
CCCCCTGCTGTG

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TCCTACTG
GCCATCTG

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TCCTACTG----
NNAGTCCCACTCNNNN

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCCTACTG-----
TNNTGCTACTGTNNNN

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---TCCTACTG
ACATCCTGNT-

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCCTACTG-----
CNNNGCTACTGTANNN

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCCTACTG
NYTTCCCGCC-