Information for motif17


Reverse Opposite:

p-value:1e-63
log p-value:-1.464e+02
Information Content per bp:1.492
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets99.4 +/- 40.1bp
Average Position of motif in Background103.1 +/- 55.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0147.2_Myc/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:MCTCCACAYGGH
-AAGCACATGG-

MA0058.2_MAX/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:MCTCCACAYGGH
-AAGCACATGG-

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--MCTCCACAYGGH--
NNTTTGCACACGGCCC

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:MCTCCACAYGGH-
---CCACGTGGNN

c-Myc/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:MCTCCACAYGGH
-NNCCACGTGG-

MA0130.1_ZNF354C/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MCTCCACAYGGH
-ATCCAC-----

MA0104.3_Mycn/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:MCTCCACAYGGH
----CACGTGGC

MA0059.1_MYC::MAX/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:MCTCCACAYGGH
-GACCACGTGGT

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-MCTCCACAYGGH
NWAACCACADNN-

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MCTCCACAYGGH
--GTCACGTGGM