Information for motif19


Reverse Opposite:

p-value:1e-41
log p-value:-9.550e+01
Information Content per bp:1.926
Number of Target Sequences with motif230.0
Percentage of Target Sequences with motif1.02%
Number of Background Sequences with motif97.7
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets101.6 +/- 54.0bp
Average Position of motif in Background90.8 +/- 55.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0527.1_ZBTB33/Jaspar

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-TCTCGCGA------
CTCTCGCGAGATCTG

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TCTCGCGA----
TCTCGCGAGAAT

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCGA-----
GTTCTCGCGAGANCC

E2F(E2F)/Cell-Cycle-Exp/Homer

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCGA-
TTTTCGCGCGAA

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCTCGCGA
VDTTTCCCGCCA

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCGA
NYTTCCCGCC-

MA0470.1_E2F4/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCGA
NNTTCCCGCCC

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCTCGCGA
DTTTCCCGCC-

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TCTCGCGA----
ACCACTCTCGGTCAC

MA0024.2_E2F1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TCTCGCGA-
CCTCCCGCCCN