Information for motif21


Reverse Opposite:

p-value:1e-37
log p-value:-8.733e+01
Information Content per bp:1.931
Number of Target Sequences with motif807.0
Percentage of Target Sequences with motif3.58%
Number of Background Sequences with motif597.1
Percentage of Background Sequences with motif2.20%
Average Position of motif in Targets97.3 +/- 54.2bp
Average Position of motif in Background102.4 +/- 57.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGAAG-
CCTTTGATGT

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:reverse strand
Alignment:-CTTTGAAG-
CCTTTGAWGT

MA0523.1_TCF7L2/Jaspar

Match Rank:3
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGAAG---
TNCCTTTGATCTTN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---CTTTGAAG-
TNCCTTTGATGT

PB0082.1_Tcf3_1/Jaspar

Match Rank:5
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGAAG----
NNTTCCTTTGATCTANA

CHR/Cell-Cycle-Exp/Homer

Match Rank:6
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:CTTTGAAG---
-TTTGAAACCG

PB0083.1_Tcf7_1/Jaspar

Match Rank:7
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----CTTTGAAG----
NNTTCCTTTGATCTNNA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.78
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGAAG----
ATTTCCTTTGATCTATA

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----CTTTGAAG----
AATCCCTTTGATCTATC

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTTTGAAG---
CCTTTTATAGNC