Information for motif22


Reverse Opposite:

p-value:1e-36
log p-value:-8.384e+01
Information Content per bp:1.650
Number of Target Sequences with motif580.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif394.8
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets100.1 +/- 56.5bp
Average Position of motif in Background95.4 +/- 57.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.91
Offset:0
Orientation:forward strand
Alignment:ATTCACACCT
ATTAACACCT

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---ATTCACACCT----
NNTTTTCACACCTTNNN

MA0009.1_T/Jaspar

Match Rank:3
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:ATTCACACCT--
-TTCACACCTAG

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:4
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:ATTCACACCT
KTTCACACCT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.80
Offset:2
Orientation:reverse strand
Alignment:ATTCACACCT
--TGACACCT

MA0103.2_ZEB1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:ATTCACACCT-
--CCTCACCTG

PH0164.1_Six4/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---ATTCACACCT----
ATAAATGACACCTATCA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ATTCACACCT---
---NNCACCTGNN

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTCACACCT----
GTATTGACAGCTNNTT

MA0479.1_FOXH1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----ATTCACACCT
TCCAATCCACA---