Information for motif23


Reverse Opposite:

p-value:1e-31
log p-value:-7.295e+01
Information Content per bp:1.879
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets94.5 +/- 49.8bp
Average Position of motif in Background109.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATCC--
GAGCACAGCAGGACA

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATCC--
CCACACAGCAGGAGA

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATCC--
CCACACAGCAGGAGA

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CACACAGCATCC------
--GATAACATCCTAGTAG

MA0488.1_JUN/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CACACAGCATCC-
ATGACATCATCNN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CACACAGCATCC-
ATTTCCCAGVAKSCY

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATCC----
TCACCCATCAATAAACA

MA0073.1_RREB1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATCC-------
CCCCAAACCACCCCCCCCCA

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CACACAGCATCC---
---ACCACATCCTGT

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CACACAGCATCC--
CCGCATAGCAACGGA