Information for motif24


Reverse Opposite:

p-value:1e-17
log p-value:-4.077e+01
Information Content per bp:1.464
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets107.5 +/- 56.0bp
Average Position of motif in Background136.6 +/- 51.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.84
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0042.1_FOXI1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGTCTATATAAC
GGATGTTTGTTT---

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGTCTATATAAC
TGTTTATTT---

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTCTATATAAC
TWGTCTGV-----

MA0040.1_Foxq1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGTCTATATAAC
TATTGTTTATT----

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGTCTATATAAC
TNTGTTTACTT---

PB0019.1_Foxl1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCTATATAAC
NNNTTTGTTTACATTTN

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGTCTATATAAC
TGTTTACTTT--

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGTCTATATAAC
TGTTTACTTT--

PB0163.1_Six6_2/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGTCTATATAAC--
ANNNGGATATATCCNNN

PB0198.1_Zfp128_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGTCTATATAAC
TGTATATATATACC