Information for motif25


Reverse Opposite:

p-value:1e-13
log p-value:-3.127e+01
Information Content per bp:1.530
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets109.0 +/- 57.6bp
Average Position of motif in Background103.4 +/- 21.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.44
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TAGCTCTCCA-
-RSCACTYRAG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAGCTCTCCA
AASCACTCAA

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TAGCTCTCCA---
AACTAGCTGTCAATAC

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TAGCTCTCCA-
AGCCACTCAAG

PH0102.1_Meis1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TAGCTCTCCA---
AACGAGCTGTCAATAC

MA0130.1_ZNF354C/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TAGCTCTCCA-
-----ATCCAC

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TAGCTCTCCA---
AAAGACCTGTCAATAC

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TAGCTCTCCA
-NGCTN----

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TAGCTCTCCA---
-AGGTCTCTAACC

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TAGCTCTCCA----
NNNCAGCTGTCAATATN