Information for motif27


Reverse Opposite:

p-value:1e-7
log p-value:-1.621e+01
Information Content per bp:1.973
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif0.08%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets107.6 +/- 54.5bp
Average Position of motif in Background135.3 +/- 75.3bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)2.88
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0016.1_Foxj1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CTCTGTATAT---
NNNNTTTGTTTACNNT

PB0080.1_Tbp_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTATAT-----
TCTTTATATATAAATA

MA0481.1_FOXP1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCTGTATAT-----
CTTTGTTTACTTTTN

MA0033.1_FOXL1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CTCTGTATAT---
-----TATGTNTA

MA0593.1_FOXP2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTGTATAT--
-TNTGTTTACTT

PB0163.1_Six6_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTATAT------
ATGGGATATATCCGCCT

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGTATAT--
ANTCCTTTGTCTNNNN

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTGTATAT
NNNNNNCTTTTATAN

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTCTGTATAT
ATTTGCATAT

MA0108.2_TBP/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CTCTGTATAT
NNNNNNCTTTTATAN