Information for motif3


Reverse Opposite:

p-value:1e-452
log p-value:-1.041e+03
Information Content per bp:1.666
Number of Target Sequences with motif3305.0
Percentage of Target Sequences with motif14.64%
Number of Background Sequences with motif1673.3
Percentage of Background Sequences with motif6.16%
Average Position of motif in Targets99.8 +/- 53.8bp
Average Position of motif in Background95.7 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-NWGTAAATAN-
TATGTAAACANG

MA0148.3_FOXA1/Jaspar

Match Rank:2
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--NWGTAAATAN---
CAAAGTAAACANNNN

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-NWGTAAATAN
AAAGTAAACA-

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-NWGTAAATAN
AAAGTAAACA-

MA0047.2_Foxa2/Jaspar

Match Rank:5
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---NWGTAAATAN
NCTAAGTAAACA-

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---NWGTAAATAN----
AAAAAGTAAACAAAGAC

MA0031.1_FOXD1/Jaspar

Match Rank:7
Score:0.85
Offset:2
Orientation:forward strand
Alignment:NWGTAAATAN
--GTAAACAT

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:NWGTAAATAN--
NDGTAAACARRN

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.85
Offset:-6
Orientation:forward strand
Alignment:------NWGTAAATAN-
NNNVCTGWGYAAACASN

MA0593.1_FOXP2/Jaspar

Match Rank:10
Score:0.85
Offset:0
Orientation:forward strand
Alignment:NWGTAAATAN-
AAGTAAACAAA