Information for motif7


Reverse Opposite:

p-value:1e-102
log p-value:-2.351e+02
Information Content per bp:1.655
Number of Target Sequences with motif1407.0
Percentage of Target Sequences with motif6.23%
Number of Background Sequences with motif912.3
Percentage of Background Sequences with motif3.36%
Average Position of motif in Targets98.7 +/- 55.4bp
Average Position of motif in Background99.3 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0143.3_Sox2/Jaspar

Match Rank:1
Score:0.90
Offset:2
Orientation:forward strand
Alignment:CGCCTTTGTT
--CCTTTGTT

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.86
Offset:2
Orientation:forward strand
Alignment:CGCCTTTGTT
--CCWTTGTY

MA0514.1_Sox3/Jaspar

Match Rank:3
Score:0.86
Offset:2
Orientation:forward strand
Alignment:CGCCTTTGTT--
--CCTTTGTTTT

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.85
Offset:1
Orientation:forward strand
Alignment:CGCCTTTGTT-
-NCCATTGTTC

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTTTGTT-----
TNNTCCTTTGTTCTNNT

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--CGCCTTTGTT-----
NNNTCCTTTGTTCTNNN

MA0515.1_Sox6/Jaspar

Match Rank:7
Score:0.80
Offset:2
Orientation:forward strand
Alignment:CGCCTTTGTT--
--CCATTGTTTT

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.80
Offset:2
Orientation:forward strand
Alignment:CGCCTTTGTT--
--CCATTGTTNY

MA0442.1_SOX10/Jaspar

Match Rank:9
Score:0.79
Offset:3
Orientation:forward strand
Alignment:CGCCTTTGTT
---CTTTGT-

MA0077.1_SOX9/Jaspar

Match Rank:10
Score:0.75
Offset:2
Orientation:forward strand
Alignment:CGCCTTTGTT-
--CCATTGTTC