Information for motif8


Reverse Opposite:

p-value:1e-100
log p-value:-2.311e+02
Information Content per bp:1.857
Number of Target Sequences with motif67.0
Percentage of Target Sequences with motif0.30%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets92.4 +/- 52.8bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ACTCTAACCCTA
AGGTCTCTAACC---

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACTCTAACCCTA
--GCTAATCC--

MA0467.1_Crx/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ACTCTAACCCTA--
---CTAATCCTCTT

MA0111.1_Spz1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTCTAACCCTA
GCTGTTACCCT-

PB0037.1_Isgf3g_1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---ACTCTAACCCTA
CAAAATCGAAACTAA

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACTCTAACCCTA
NNACTTACCTN-

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ACTCTAACCCTA
----TAATCCCN

PB0174.1_Sox30_2/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----ACTCTAACCCTA
NCGTATTATAATCNTA

TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTCTAACCCTA
TGACCTTTGACCTC-

MA0504.1_NR2C2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---ACTCTAACCCTA
TGACCTCTGACCCCN