Information for motif1


Reverse Opposite:

p-value:1e-265
log p-value:-6.123e+02
Information Content per bp:1.833
Number of Target Sequences with motif3914.0
Percentage of Target Sequences with motif27.32%
Number of Background Sequences with motif1966.9
Percentage of Background Sequences with motif15.84%
Average Position of motif in Targets100.3 +/- 54.5bp
Average Position of motif in Background102.2 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0593.1_FOXP2/Jaspar

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-AGTAAACA--
AAGTAAACAAA

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:2
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAACA---
NDGTAAACARRN

MA0031.1_FOXD1/Jaspar

Match Rank:3
Score:0.94
Offset:1
Orientation:forward strand
Alignment:AGTAAACA-
-GTAAACAT

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--AGTAAACA
AAAGTAAACA

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer

Match Rank:5
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:AGTAAACA-
-GTAAACAG

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:6
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--AGTAAACA
AAAGTAAACA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:7
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--AGTAAACA--
TATGTAAACANG

MA0148.3_FOXA1/Jaspar

Match Rank:8
Score:0.91
Offset:-3
Orientation:reverse strand
Alignment:---AGTAAACA----
CAAAGTAAACANNNN

MA0480.1_Foxo1/Jaspar

Match Rank:9
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:AGTAAACA---
TGTAAACAGGA

MA0047.2_Foxa2/Jaspar

Match Rank:10
Score:0.91
Offset:-4
Orientation:reverse strand
Alignment:----AGTAAACA
NCTAAGTAAACA