Information for motif13


Reverse Opposite:

p-value:1e-37
log p-value:-8.720e+01
Information Content per bp:1.447
Number of Target Sequences with motif49.0
Percentage of Target Sequences with motif0.34%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets94.1 +/- 54.2bp
Average Position of motif in Background101.2 +/- 15.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.82
Offset:1
Orientation:forward strand
Alignment:TCACACCTGCTC
-CACAGCTGCAG

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.75
Offset:1
Orientation:forward strand
Alignment:TCACACCTGCTC
-NNCACCTGNN-

MA0103.2_ZEB1/Jaspar

Match Rank:3
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TCACACCTGCTC
CCTCACCTG---

E2A(HLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TCACACCTGCTC
NNACAGCTGC--

PB0003.1_Ascl2_1/Jaspar

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TCACACCTGCTC---
CTCAGCAGCTGCTACTG

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TCACACCTGCTC
--NCAGCTGCTG

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TCACACCTGCTC
TGACACCT----

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TCACACCTGCTC
---CAGCTGNT-

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TCACACCTGCTC
--ACAGCTGTTN

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TCACACCTGCTC---
CNGACACCTGTTCNNN