Information for motif15


Reverse Opposite:

p-value:1e-33
log p-value:-7.633e+01
Information Content per bp:1.982
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets102.5 +/- 50.4bp
Average Position of motif in Background136.0 +/- 44.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.81
Offset:2
Orientation:reverse strand
Alignment:AGAAGCTTGG
--AAGCTTG-

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGAAGCTTGG
NGAAGC----

MA0467.1_Crx/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGAAGCTTGG
AAGAGGATTAG

MA0161.1_NFIC/Jaspar

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AGAAGCTTGG--
------TTGGCA

MA0522.1_Tcf3/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGAAGCTTGG
NTGCAGCTGTG

PB0161.1_Rxra_2/Jaspar

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AGAAGCTTGG---
TCGCGAAGGTTGTACT

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----AGAAGCTTGG------
TTCTAGAANNTTCCAGAANN

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGAAGCTTGG
---NGCTN--

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-6
Orientation:reverse strand
Alignment:------AGAAGCTTGG
NNNTTAGGTAGCNTNT

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------AGAAGCTTGG
ATGTACAGTAGCAAAG