Information for motif17


Reverse Opposite:

p-value:1e-31
log p-value:-7.152e+01
Information Content per bp:1.530
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif0.21%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets96.7 +/- 56.7bp
Average Position of motif in Background102.0 +/- 8.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAGATGTTCT
AACAGATGGTCN

PH0084.1_Irx3_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TAGATGTTCT---
AATATACATGTAATATA

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TAGATGTTCT--
AAGGCCAGATGGTCCGG

PH0083.1_Irx3_1/Jaspar

Match Rank:4
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TAGATGTTCT---
AAAATACATGTAATACT

PH0086.1_Irx5/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TAGATGTTCT---
AATATACATGTAAAATT

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAGATGTTCT--
ANTTNTACATGTANTTN

PH0085.1_Irx4/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAGATGTTCT--
NNTTTTACATGTANNNT

PH0082.1_Irx2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----TAGATGTTCT--
ANTNTTACATGTATNTA

PB0125.1_Gata3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TAGATGTTCT-------
TTTTGTAGATTTTATCGACTTA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TAGATGTTCT---
---CTGTTCCTGG