Information for motif22


Reverse Opposite:

p-value:1e-27
log p-value:-6.409e+01
Information Content per bp:1.720
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets102.3 +/- 51.6bp
Average Position of motif in Background79.1 +/- 38.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.41
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCGTGCT
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGAGGCCGTGCT-
AGGGGGCGGGGCTG

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGAGGCCGTGCT
GGGNGGGGGCGGGGC-

MA0146.2_Zfx/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGAGGCCGTGCT---
-CAGGCCNNGGCCNN

MA0079.3_SP1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGAGGCCGTGCT
GGGGGCGGGGC-

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGGCCGTGCT
ACAGGATGTGGT

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGAGGCCGTGCT
AGAGGAAGTG--

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGAGGCCGTGCT------
-CGAACAGTGCTCACTAT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGAGGCCGTGCT
--AGGCCTNG--

MA0162.2_EGR1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGAGGCCGTGCT
GGCGGGGGCGGGGG-