Information for motif24


Reverse Opposite:

p-value:1e-26
log p-value:-6.164e+01
Information Content per bp:1.850
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets85.7 +/- 52.8bp
Average Position of motif in Background38.1 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0051.1_IRF2/Jaspar

Match Rank:1
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GTTTGGCTCTCC
GTTTTGCTTTCACTTTCC

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTTTGGCTCTCC
--TTGGCA----

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGGCTCTCC
CCGATTGGCT----

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTTTGGCTCTCC
TCAGTTTCATTTTCC

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:5
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTTTGGCTCTCC
AGTTTCAGTTTC-

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GTTTGGCTCTCC
----NGCTN---

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGGCTCTCC
RSTTTCRSTTTC-

Tbox:Smad/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGGCTCTCC
TGTCTGDCACCT-

POL004.1_CCAAT-box/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTTTGGCTCTCC
TGATTGGCTANN-

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTTTGGCTCTCC
TGGGTGTGGC-----