Information for motif25


Reverse Opposite:

p-value:1e-25
log p-value:-5.974e+01
Information Content per bp:1.530
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets100.1 +/- 51.6bp
Average Position of motif in Background89.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:TTGCTGTCAC------
-AGCTGTCACTCACCT

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTGCTGTCAC----
NNNCAGCTGTCAATATN

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGTCAC---
AACTAGCTGTCAATAC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGCTGTCAC-
-TGCTGACTCA

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGTCAC---
AAGCACCTGTCAATAT

PH0105.1_Meis3/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGTCAC---
AATTACCTGTCAATAC

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TTGCTGTCAC---
-GSCTGTCACTCA

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTGCTGTCAC
--GCTGTG--

PH0102.1_Meis1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TTGCTGTCAC---
AACGAGCTGTCAATAC

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TTGCTGTCAC----
--NCTGTCAATCAN