Information for motif26


Reverse Opposite:

p-value:1e-23
log p-value:-5.444e+01
Information Content per bp:1.878
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets119.0 +/- 53.2bp
Average Position of motif in Background97.1 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TCACKTGGAT
GTCACGTGGM-

MA0093.2_USF1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TCACKTGGAT
GGTCACGTGGC-

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCACKTGGAT
GTCACGTGGT-

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCACKTGGAT
GGTCACGTGA--

MA0104.3_Mycn/Jaspar

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TCACKTGGAT
-CACGTGGC-

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:6
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCACKTGGAT
-CACGTGGN-

MA0526.1_USF2/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCACKTGGAT
GGTCACATGAC-

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCACKTGGAT
GHCACGTG---

n-Myc(HLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCACKTGGAT
NNCCACGTGG--

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCACKTGGAT
GNCACGTG---