Information for motif27


Reverse Opposite:

p-value:1e-23
log p-value:-5.398e+01
Information Content per bp:1.895
Number of Target Sequences with motif130.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif40.4
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets92.1 +/- 55.2bp
Average Position of motif in Background110.9 +/- 60.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.61
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTGAG---
TCNCCTGCTGNGNNN

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTGAG---
NNTCCTGCTGTGNNN

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTGAG---
TNTCCTGCTGTGNNG

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-ACATGCTGAG----
AAANTGCTGACTNAG

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTGAG---
AAAWWTGCTGACWWD

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--ACATGCTGAG
CCCCCTGCTGTG

MA0495.1_MAFF/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACATGCTGAG-----
NAAAANTGCTGACTCAGC

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.67
Offset:3
Orientation:forward strand
Alignment:ACATGCTGAG---
---TGCTGACTCA

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACATGCTGAG----
--HTGCTGAGTCAT

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACATGCTGAG----
AWWNTGCTGAGTCAT