Information for motif28


Reverse Opposite:

p-value:1e-22
log p-value:-5.175e+01
Information Content per bp:1.804
Number of Target Sequences with motif200.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif79.5
Percentage of Background Sequences with motif0.64%
Average Position of motif in Targets97.2 +/- 56.1bp
Average Position of motif in Background95.6 +/- 95.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.86
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCAC----
AGCTCGGCGCCAAAAGC

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCAC----
CCTTCGGCGCCAAAAGG

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGCGCCAC
AGCGCGCC--

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCAC---
TTGGGGGCGCCCCTAG

MA0024.2_E2F1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGCGCCAC-
CGGGCGGGAGG

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGCGCCAC--
GGCGGGAAAH

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCGCCAC---
NTCGCGCGCCTTNNN

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGCGCCAC---
ANCGCGCGCCCTTNN

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCCAC----
TACGCCCCGCCACTCTG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCCAC---
TGGCGGGAAAHB