Information for motif29


Reverse Opposite:

p-value:1e-21
log p-value:-5.031e+01
Information Content per bp:1.951
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets99.4 +/- 51.0bp
Average Position of motif in Background125.4 +/- 49.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0150.1_Mybl1_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GCAGTCGG---
CACGGCAGTTGGTNN

PB0149.1_Myb_2/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGTCGG---
NNNTGGCAGTTGGTNN

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCAGTCGG
TGGCAGTTGG

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCAGTCGG--
CCAGACRSVB

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCAGTCGG
CCAGACAG

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTCGG---
NNNANTGCAGTGCNNTT

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTCGG---
NTNNNAGGAGTCTCNTN

MA0461.1_Atoh1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCAGTCGG-
-CAGATGGC

MA0100.2_Myb/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTCGG
TGGCAGTTGN

MA0522.1_Tcf3/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCAGTCGG-
NTGCAGCTGTG