Information for motif30


Reverse Opposite:

p-value:1e-21
log p-value:-4.945e+01
Information Content per bp:1.693
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.1 +/- 58.1bp
Average Position of motif in Background58.2 +/- 14.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.96
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0479.1_FOXH1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---MATACASRSTGC
TCCAATCCACA----

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--MATACASRSTGC
SSAATCCACANN--

MA0032.1_FOXC1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:MATACASRSTGC
--TACTNNNN--

MA0007.2_AR/Jaspar

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-MATACASRSTGC--
AAGAACAGAATGTTC

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.52
Offset:2
Orientation:forward strand
Alignment:MATACASRSTGC-------
--CGAACAGTGCTCACTAT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:MATACASRSTGC------
-AATCGCACTGCATTCCG

POL002.1_INR/Jaspar

Match Rank:7
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:MATACASRSTGC
----NNNANTGA

MA0040.1_Foxq1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:MATACASRSTGC
AATAAACAATN-

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:MATACASRSTGC----
AGNACAGNCTGTTCTN

MA0113.2_NR3C1/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:MATACASRSTGC---
AGNACATTNTGTTCT