Information for motif31


Reverse Opposite:

p-value:1e-20
log p-value:-4.728e+01
Information Content per bp:1.881
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets96.2 +/- 61.8bp
Average Position of motif in Background135.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---KGGTATCTGAGA--
NTNNCGTATCCAAGTNN

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-KGGTATCTGAGA--
NNNGTAACTANGNNA

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:KGGTATCTGAGA
YSTTATCT----

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----KGGTATCTGAGA-
AATAGGGTATCATATAT

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KGGTATCTGAGA-----
--GNNACCGAGAATNNN

PB0158.1_Rfx3_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----KGGTATCTGAGA------
NNTNGNNGTAACCAAGNNNNAGN

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----KGGTATCTGAGA-
NNNCTGATATCTCNNNN

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:KGGTATCTGAGA-
-GWAAYHTGABMC

MA0036.2_GATA2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----KGGTATCTGAGA
AGATTCTTATCTGT--

PH0161.1_Six1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----KGGTATCTGAGA-
GATGGGGTATCATTTTT