Information for motif37


Reverse Opposite:

p-value:1e-15
log p-value:-3.646e+01
Information Content per bp:1.848
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif17.1
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets102.7 +/- 53.6bp
Average Position of motif in Background81.9 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.74
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0032.1_FOXC1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTAGAC
GGTAAGTA---

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GTGTGTAGAC-
CGTGGGTGGTCC

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGTGTAGAC---
-TATGTAAACANG

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGTGTAGAC---
NNNNTTTGTTTACNNT

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GTGTGTAGAC-
GGGCCGTGTGCAAAAA

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTAGAC-----
NNGTATGTGCACATNNN

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTGTGTAGAC--
----BCAGACWA

PB0013.1_Eomes_1/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GTGTGTAGAC-
GAAAAGGTGTGAAAATT

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTGTGTAGAC------
NSTGTTTRCWCAGBNNN

PB0104.1_Zscan4_1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGTAGAC-----
NTNTATGTGCACATNNN