Information for motif38


Reverse Opposite:

p-value:1e-14
log p-value:-3.318e+01
Information Content per bp:1.530
Number of Target Sequences with motif47.0
Percentage of Target Sequences with motif0.33%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets95.6 +/- 52.2bp
Average Position of motif in Background102.1 +/- 39.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0103.2_ZEB1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TCGCCTGG
CCTCACCTG-

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCGCCTGG---
NNGTCGCGTGNCAC

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCGCCTGG-
NNCACCTGNN

MA0154.2_EBF1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TCGCCTGG--
GTCCCCAGGGA

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCGCCTGG
VBSYGTCTGG

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCGCCTGG
CTGTCTGG

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCGCCTGG---
-GGTCTGGCAT

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TCGCCTGG----
TCCCCTGGGGAC

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TCGCCTGG-------
TGCCCTGGGGCNANN

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TCGCCTGG
NNACTTGCCTT-