Information for motif39


Reverse Opposite:

p-value:1e-12
log p-value:-2.954e+01
Information Content per bp:1.923
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets98.1 +/- 58.2bp
Average Position of motif in Background146.7 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.56
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ACACTGTAAC----
AGGACGCTGTAAAGGGA

PH0157.1_Rhox11_1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACACTGTAAC----
AAGACGCTGTAAAGCGA

PB0051.1_Osr2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACACTGTAAC----
ATGTACAGTAGCAAAG

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACACTGTAAC-
GAAACTGAAACT

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACACTGTAAC-------
--NNNGTAACTANGNNA

PB0050.1_Osr1_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ACACTGTAAC----
ATTTACAGTAGCAAAA

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACACTGTAAC--
--ACTGAAACCA

PB0195.1_Zbtb3_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACACTGTAAC---
CAATCACTGGCAGAAT

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACACTGTAAC
GGTAAGTA--

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ACACTGTAAC---
AATCGCACTGCATTCCG