Information for motif7


Reverse Opposite:

p-value:1e-52
log p-value:-1.202e+02
Information Content per bp:1.939
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif0.31%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets103.2 +/- 54.6bp
Average Position of motif in Background91.5 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-5
Orientation:forward strand
Alignment:-----ATAACAACCC
ATGTCACAACAACAC

PB0119.1_Foxa2_2/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ATAACAACCC-
AAAAATAACAAACGG

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ATAACAACCC--
CAAACAACAACACCT

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:forward strand
Alignment:ATAACAACCC
---ACAACAC

PB0123.1_Foxl1_2/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ATAACAACCC-
ATATCAAAACAAAACA

PB0055.1_Rfx4_1/Jaspar

Match Rank:6
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATAACAACCC-
TACCATAGCAACGGT

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATAACAACCC-
CCGCATAGCAACGGA

MA0036.2_GATA2/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----ATAACAACCC
NCAGATAAGAANNN

MA0084.1_SRY/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATAACAACCC
GTAAACAAT--

MA0087.1_Sox5/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATAACAACCC
-NAACAAT--