Information for motif13


Reverse Opposite:

p-value:1e-80
log p-value:-1.859e+02
Information Content per bp:1.530
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets104.1 +/- 53.0bp
Average Position of motif in Background154.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCGCGATCCG
----GCTCCG

PB0124.1_Gabpa_2/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCGCGATCCG------
CCGTCTTCCCCCTCAC

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCGCGATCCG-
GCCGCCATCTTG

PB0128.1_Gcm1_2/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCGATCCG--
NTCNTCCCCTATNNGNN

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGATCCG-
NNNACCGAGAGTNNN

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------CCGCGATCCG-
TACGCCCCGCCACTCTG

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCGCGATCCG---
GCCGCGCAGTGCGT

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CCGCGATCCG--
--GCCATCTGTT

PB0138.1_Irf4_2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CCGCGATCCG-
GNNACCGAGAATNNN

MA0461.1_Atoh1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCGCGATCCG
--GCCATCTG