Information for motif17


Reverse Opposite:

p-value:1e-54
log p-value:-1.245e+02
Information Content per bp:1.683
Number of Target Sequences with motif57.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets95.7 +/- 50.5bp
Average Position of motif in Background125.4 +/- 50.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:CGTGACGTGG
--TGACGT--

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGTGACGTGG
GGTCACGTGA

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGTGACGTGG-
ACAGGATGTGGT

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CGTGACGTGG
NCGTGACN---

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGTGACGTGG-
-GTCACGTGGM

MA0130.1_ZNF354C/Jaspar

Match Rank:6
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:CGTGACGTGG--
------GTGGAT

MA0104.3_Mycn/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CGTGACGTGG-
---CACGTGGC

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGTGACGTGG
--GGACGTGC

CRE(bZIP)/Promoter/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGTGACGTGG-
CGGTGACGTCAC

E-box(HLH)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGTGACGTGG
CCGGTCACGTGA