Information for motif18


Reverse Opposite:

p-value:1e-48
log p-value:-1.115e+02
Information Content per bp:1.780
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets111.4 +/- 48.7bp
Average Position of motif in Background125.0 +/- 4.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GCCAGCRCGCCT
---AGCGCGCC-

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGCRCGCCT
TGCCAA-------

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCCAGCRCGCCT
--CAGCC-----

MA0461.1_Atoh1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCAGCRCGCCT
--CAGATGGC--

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCAGCRCGCCT----
-NTCGCGCGCCTTNNN

MA0088.1_znf143/Jaspar

Match Rank:6
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCCAGCRCGCCT---
GATTTCCCATAATGCCTTGC

MA0119.1_TLX1::NFIC/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCCAGCRCGCCT-
TGGCACCATGCCAA

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGCRCGCCT
TGAGTCAGCA-----

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GCCAGCRCGCCT
ATTTCCCAGVAKSCY-

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGCRCGCCT
ATGCCAGACN----