Information for motif20


Reverse Opposite:

p-value:1e-30
log p-value:-7.121e+01
Information Content per bp:1.968
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets103.1 +/- 59.6bp
Average Position of motif in Background74.4 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0078.1_Sox17/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGACAGTG--
-GACAATGNN

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CGACAGTG----
NNNNTGCCAGTGATTG

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----CGACAGTG--
NNNACCGAGAGTNNN

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGACAGTG
-CACAGN-

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGACAGTG-----
CACGGCAGTTGGTNN

MA0100.2_Myb/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGACAGTG--
TGGCAGTTGN

MA0442.1_SOX10/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGACAGTG
--ACAAAG

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CGACAGTG-----
NNNTGGCAGTTGGTNN

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGACAGTG--
TTGACCGAGAATTCC

PB0138.1_Irf4_2/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGACAGTG--
GNNACCGAGAATNNN