Information for motif21


Reverse Opposite:

p-value:1e-30
log p-value:-7.117e+01
Information Content per bp:1.530
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets106.2 +/- 58.0bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0028.1_ELK1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCGGACGACG
GAGCCGGAAG---

MF0001.1_ETS_class/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGGACGACG
ACCGGAAG---

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCGGACGACG
ANCCGGAAGT--

MA0076.2_ELK4/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCGGACGACG
NCCGGAAGTGG

MA0062.2_GABPA/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCGGACGACG-
CCGGAAGTGGC

ETS(ETS)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCGGACGACG
AACCGGAAGT--

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGGACGACG
RCCGGAAGTD-

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGGACGACG
AACCGGAAGT--

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGGACGACG
NACCGGAAGT--

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCGGACGACG
RCCGGAARYN-