Information for motif24


Reverse Opposite:

p-value:1e-19
log p-value:-4.454e+01
Information Content per bp:1.530
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif9.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets98.6 +/- 60.1bp
Average Position of motif in Background120.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0065.1_Sox15_1/Jaspar

Match Rank:1
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---TCTATTGT------
ANNTCTATTGTTCNNNA

MA0077.1_SOX9/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TCTATTGT--
-CCATTGTTC

PB0073.1_Sox7_1/Jaspar

Match Rank:3
Score:0.81
Offset:-6
Orientation:reverse strand
Alignment:------TCTATTGT--------
TNNANNTCTATTGTTNTNNANN

PB0074.1_Sox8_1/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---TCTATTGT------
GTATCTATTGTTCTTTA

PB0173.1_Sox21_2/Jaspar

Match Rank:5
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--TCTATTGT-------
AATCAATTGTTCCGCTA

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TCTATTGT-------
CNNNTATTGTTCNNNNN

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TCTATTGT-----
ANNTCCATTGTTCNNN

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--TCTATTGT-----
NNNCCATTGTGTNAN

MA0078.1_Sox17/Jaspar

Match Rank:9
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TCTATTGT-
CTCATTGTC

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.76
Offset:1
Orientation:forward strand
Alignment:TCTATTGT---
-CCATTGTTNY