Information for motif3


Reverse Opposite:

p-value:1e-156
log p-value:-3.610e+02
Information Content per bp:1.707
Number of Target Sequences with motif105.0
Percentage of Target Sequences with motif1.10%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets108.2 +/- 56.4bp
Average Position of motif in Background138.2 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0506.1_NRF1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:ACGCCGAGGCGC
-TGCGCAGGCGC

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACGCCGAGGCGC--
--GCGCATGCGCAG

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:ACGCCGAGGCGC---
-------GGCGCGCT

NRF1/Promoter/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ACGCCGAGGCGC--
--GCGCATGCGCAC

PB0113.1_E2F3_2/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACGCCGAGGCGC------
-NNNNTTGGCGCCGANNN

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACGCCGAGGCGC-
-GGGGGCGGGGCC

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:ACGCCGAGGCGC
-GGGGGCGGGGC

PB0052.1_Plagl1_1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACGCCGAGGCGC------
--TTGGGGGCGCCCCTAG

MA0146.2_Zfx/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-ACGCCGAGGCGC-
CAGGCCNNGGCCNN

PB0010.1_Egr1_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACGCCGAGGCGC-
ANTGCGGGGGCGGN