Information for motif4


Reverse Opposite:

p-value:1e-156
log p-value:-3.594e+02
Information Content per bp:1.741
Number of Target Sequences with motif211.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif12.6
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets95.7 +/- 57.8bp
Average Position of motif in Background117.9 +/- 65.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---GMGCGGGCGG-
ANTGCGGGGGCGGN

MA0162.2_EGR1/Jaspar

Match Rank:2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GMGCGGGCGG---
GGCGGGGGCGGGGG

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-GMGCGGGCGG-
NGCGTGGGCGGR

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GMGCGGGCGG----
NNNAAGGGGGCGGGNNN

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GMGCGGGCGG---
GTGCGTGGGCGGGNG

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GMGCGGGCGG
TGCGTGGGYG-

MA0516.1_SP2/Jaspar

Match Rank:7
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GMGCGGGCGG---
GGGNGGGGGCGGGGC

MA0079.3_SP1/Jaspar

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GMGCGGGCGG---
--GGGGGCGGGGC

MA0597.1_THAP1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GMGCGGGCGG
-TNNGGGCAG

MA0469.1_E2F3/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GMGCGGGCGG---
NNGTGNGGGCGGGAG