Information for motif5


Reverse Opposite:

p-value:1e-133
log p-value:-3.082e+02
Information Content per bp:1.668
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif1.15%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets104.2 +/- 54.3bp
Average Position of motif in Background62.8 +/- 76.2bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCGMTTCG-------
NCGACCGCTCCGCTCGAAA

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCGMTTCG
NRYTTCCGGY---

MA0028.1_ELK1/Jaspar

Match Rank:3
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCGMTTCG
CTTCCGGNNN-

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCGMTTCG
NRYTTCCGGH---

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCGMTTCG
ACTTCCGGNT--

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCGMTTCG
HACTTCCGGY---

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCGMTTCG--
TCGTACCCGCATCATT

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCGMTTCG--
CCGATTGGCT

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CCGMTTCG
--GCTCCG

PB0011.1_Ehf_1/Jaspar

Match Rank:10
Score:0.52
Offset:-6
Orientation:reverse strand
Alignment:------CCGMTTCG-
TNACTTCCGGNTNNN