Information for motif6


Reverse Opposite:

p-value:1e-126
log p-value:-2.918e+02
Information Content per bp:1.676
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets98.7 +/- 57.6bp
Average Position of motif in Background81.0 +/- 33.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0527.1_ZBTB33/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:GTCTCGCGTG-----
CTCTCGCGAGATCTG

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GTCTCGCGTG---
-TCTCGCGAGAAT

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTCTCGCGTG----
GTTCTCGCGAGANCC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:4
Score:0.71
Offset:4
Orientation:forward strand
Alignment:GTCTCGCGTG
----TGCGTG

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTCTCGCGTG---
---TTGCGTGCVA

PB0147.1_Max_2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTCTCGCGTG----
NNGTCGCGTGNCAC

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GTCTCGCGTG--
----CACGTGGN

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GTCTCGCGTG--------
NTNNTNGTCACGTGACNNNTNC

MA0464.1_Bhlhe40/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTCTCGCGTG---
--CTCACGTGCAC

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTCGCGTG
CTGTCTGG----