Information for motif9


Reverse Opposite:

p-value:1e-91
log p-value:-2.098e+02
Information Content per bp:1.635
Number of Target Sequences with motif700.0
Percentage of Target Sequences with motif7.31%
Number of Background Sequences with motif228.1
Percentage of Background Sequences with motif3.10%
Average Position of motif in Targets100.0 +/- 61.0bp
Average Position of motif in Background105.7 +/- 100.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.92
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGRKGGC-----
TGGCCACCAGGTGGCACTNT

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGRKGGC-------
GCCASCAGGGGGCGCYVNNG

MA0139.1_CTCF/Jaspar

Match Rank:3
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGRKGGC----
TGGCCACCAGGGGGCGCTA

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CCACTAGRKGGC
--AACAGATGGC

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCACTAGRKGGC
----CAGATGGC

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CCACTAGRKGGC------
-NNNAAGGGGGCGGGNNN

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGRKGGC
CACCCCCGGGGGGG

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGRKGGC
CACAGCAGGGGG-

MA0116.1_Zfp423/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGRKGGC
GCACCCCTGGGTGCC

MA0095.2_YY1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CCACTAGRKGGC---
---CAAGATGGCGGC