Information for motif12


Reverse Opposite:

p-value:1e-23
log p-value:-5.390e+01
Information Content per bp:1.939
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif2.49%
Number of Background Sequences with motif403.8
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets96.9 +/- 48.2bp
Average Position of motif in Background102.9 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0197.1_Zfp105_2/Jaspar

Match Rank:1
Score:0.72
Offset:-6
Orientation:reverse strand
Alignment:------TATTGACG---
NAAANTTATTGAANCAN

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TATTGACG-
---TGACGT

PH0134.1_Pbx1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TATTGACG-----
NNNNNATTGATGNGTGN

MA0078.1_Sox17/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TATTGACG
CTCATTGTC-

MA0018.2_CREB1/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TATTGACG---
---TGACGTCA

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TATTGACG--
CNTGTTTACATA

MA0047.2_Foxa2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TATTGACG----
TGTTTACTTAGG

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATTGACG-------
NTATTGACAGGTNNTN

PH0105.1_Meis3/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATTGACG-------
GTATTGACAGGTNNTT

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TATTGACG-
NTATYGATCH