Information for motif19


Reverse Opposite:

p-value:1e-13
log p-value:-3.201e+01
Information Content per bp:1.540
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif2.16%
Number of Background Sequences with motif432.7
Percentage of Background Sequences with motif0.98%
Average Position of motif in Targets98.3 +/- 53.3bp
Average Position of motif in Background89.3 +/- 58.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-TGCGCATGCG-
CTGCGCATGCGC

NRF1/Promoter/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-TGCGCATGCG-
GTGCGCATGCGC

MA0506.1_NRF1/Jaspar

Match Rank:3
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:TGCGCATGCG-
TGCGCAGGCGC

PB0027.1_Gmeb1_1/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TGCGCATGCG-
NNNTNGTACGTAANNNN

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TGCGCATGCG--
NNTTTGCACACGGCCC

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCGCATGCG-----
TGGCGCGCGCGCCTGA

MA0069.1_Pax6/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGCGCATGCG--
TTCACGCATGAGTT

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGCGCATGCG
AGCGCGCC----

PB0026.1_Gm397_1/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------TGCGCATGCG-
CAGATGTGCACATACGT

PB0133.1_Hic1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TGCGCATGCG-
GGGTGTGCCCAAAAGG