Information for motif2


Reverse Opposite:

p-value:1e-144
log p-value:-3.336e+02
Information Content per bp:1.676
Number of Target Sequences with motif1437.0
Percentage of Target Sequences with motif26.07%
Number of Background Sequences with motif5769.1
Percentage of Background Sequences with motif13.10%
Average Position of motif in Targets101.4 +/- 53.0bp
Average Position of motif in Background93.9 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.34
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.96
Offset:-2
Orientation:reverse strand
Alignment:--GCCCCGCCCMCH
NAGCCCCGCCCCCN

MA0599.1_KLF5/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCMCH
GCCCCGCCCC--

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.95
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCMCH
GCCCCGCCCCC-

MA0039.2_Klf4/Jaspar

Match Rank:4
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCMCH
GCCCCACCCA--

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCMCH
GGCCCCGCCCCC-

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGCCCMCH-
TCGACCCCGCCCCTAT

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:GCCCCGCCCMCH
GCCMCRCCCH--

MA0516.1_SP2/Jaspar

Match Rank:8
Score:0.91
Offset:0
Orientation:forward strand
Alignment:GCCCCGCCCMCH---
GCCCCGCCCCCTCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:GCCCCGCCCMCH
-CCCCCCCC---

MA0493.1_Klf1/Jaspar

Match Rank:10
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GCCCCGCCCMCH
GGCCACACCCA--