Information for motif25


Reverse Opposite:

p-value:1e-3
log p-value:-8.660e+00
Information Content per bp:1.964
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.3 +/- 59.6bp
Average Position of motif in Background114.9 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TCTGGGAGGTGT------
--GCGGAGGTGTCGCCTC

GFY-Staf/Promoters/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TCTGGGAGGTGT----
GCATTCTGGGAATTGTAGTT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.63
Offset:6
Orientation:forward strand
Alignment:TCTGGGAGGTGT--
------AGGTGTCA

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGGGAGGTGT
RGSMTBCTGGGAAAT--

PB0025.1_Glis2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGGAGGTGT---
NTNTGGGGGGTCNNNA

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TCTGGGAGGTGT
CGTGGGTGGTCC

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCTGGGAGGTGT---
---GGGAATTGTAGT

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TCTGGGAGGTGT
GGTCTGGCAT----

PB0098.1_Zfp410_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCTGGGAGGTGT--
TATTATGGGATGGATAA

E2A-nearPU.1(HLH)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCTGGGAGGTGT-
---NNCAGGTGNN