Information for motif7


Reverse Opposite:

p-value:1e-52
log p-value:-1.208e+02
Information Content per bp:1.651
Number of Target Sequences with motif522.0
Percentage of Target Sequences with motif9.47%
Number of Background Sequences with motif2011.6
Percentage of Background Sequences with motif4.57%
Average Position of motif in Targets101.6 +/- 52.1bp
Average Position of motif in Background98.0 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.92
Offset:1
Orientation:forward strand
Alignment:DCHCAGCAGGVD-
-CACAGCAGGGGG

PB0205.1_Zic1_2/Jaspar

Match Rank:2
Score:0.87
Offset:-2
Orientation:forward strand
Alignment:--DCHCAGCAGGVD-
CCACACAGCAGGAGA

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--DCHCAGCAGGVD-
CCACACAGCAGGAGA

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--DCHCAGCAGGVD-
GAGCACAGCAGGACA

MA0461.1_Atoh1/Jaspar

Match Rank:5
Score:0.81
Offset:3
Orientation:forward strand
Alignment:DCHCAGCAGGVD
---CAGATGGC-

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:DCHCAGCAGGVD
NAHCAGCTGD--

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:forward strand
Alignment:DCHCAGCAGGVD
-ANCAGCTG---

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.73
Offset:2
Orientation:forward strand
Alignment:DCHCAGCAGGVD
--NCAGCTGCTG

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.73
Offset:1
Orientation:forward strand
Alignment:DCHCAGCAGGVD
-GACAGCTGCAG

MA0521.1_Tcf12/Jaspar

Match Rank:10
Score:0.73
Offset:1
Orientation:forward strand
Alignment:DCHCAGCAGGVD
-AACAGCTGCAG