Information for motif1


Reverse Opposite:

p-value:1e-509
log p-value:-1.174e+03
Information Content per bp:1.822
Number of Target Sequences with motif377.0
Percentage of Target Sequences with motif9.90%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets101.2 +/- 51.7bp
Average Position of motif in Background61.2 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:RKCTCCGCCC--
GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-RKCTCCGCCC---
NAGCCCCGCCCCCN

MA0599.1_KLF5/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:forward strand
Alignment:RKCTCCGCCC-
-GCCCCGCCCC

MA0079.3_SP1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:forward strand
Alignment:RKCTCCGCCC--
-GCCCCGCCCCC

PB0039.1_Klf7_1/Jaspar

Match Rank:5
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--RKCTCCGCCC----
TCGACCCCGCCCCTAT

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.78
Offset:1
Orientation:forward strand
Alignment:RKCTCCGCCC------
-GCCCCGCCCCCTCCC

MA0039.2_Klf4/Jaspar

Match Rank:7
Score:0.78
Offset:1
Orientation:reverse strand
Alignment:RKCTCCGCCC-
-GCCCCACCCA

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.77
Offset:0
Orientation:forward strand
Alignment:RKCTCCGCCC------
ATCCCCGCCCCTAAAA

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.76
Offset:0
Orientation:forward strand
Alignment:RKCTCCGCCC-------
GGTCCCGCCCCCTTCTC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:RKCTCCGCCC-
-GCCMCRCCCH