Information for motif10


Reverse Opposite:

p-value:1e-124
log p-value:-2.871e+02
Information Content per bp:1.718
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets101.1 +/- 51.3bp
Average Position of motif in Background80.1 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-GCCAATCGGCGC
AGCCAATCGG---

MA0502.1_NFYB/Jaspar

Match Rank:2
Score:0.78
Offset:-6
Orientation:forward strand
Alignment:------GCCAATCGGCGC
AAATGGACCAATCAG---

MA0060.2_NFYA/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATCGGCGC---
TGGACCAATCAGCACTCT

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GCCAATCGGCGC
ACTAGCCAATCA----

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCCAATCGGCGC
TGCCAA-------

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GCCAATCGGCGC
NTGCCCTTGGGCGN

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCCAATCGGCGC
--AAATCACTGC

PH0109.1_Nkx1-1/Jaspar

Match Rank:8
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GCCAATCGGCGC-
NCCCACTAATTAGCGCA

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----GCCAATCGGCGC
ACTATGCCAACCTACC-

MA0038.1_Gfi1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCCAATCGGCGC
-CAAATCACTG-