Information for motif16


Reverse Opposite:

p-value:1e-73
log p-value:-1.683e+02
Information Content per bp:1.613
Number of Target Sequences with motif429.0
Percentage of Target Sequences with motif11.26%
Number of Background Sequences with motif97.0
Percentage of Background Sequences with motif4.23%
Average Position of motif in Targets99.2 +/- 54.5bp
Average Position of motif in Background85.5 +/- 135.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CGGCGAAT---
-AGCCAATCGG

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CGGCGAAT--
ACTAGCCAATCA

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCGAAT----
NNNTNGGGCGTATNNTN

MA0056.1_MZF1_1-4/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGCGAAT
TGGGGA--

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGCGAAT--
AAGGCAAGTGT

MA0161.1_NFIC/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGCGAAT
-TGCCAA-

MA0502.1_NFYB/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGGCGAAT---
AAATGGACCAATCAG

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CGGCGAAT---
GNNACCGAGAATNNN

PH0098.1_Lhx8/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CGGCGAAT-------
CACCGCTAATTAGNNGN

PH0089.1_Isx/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGCGAAT-------
ACNNCTAATTAGNNNN