Information for motif17


Reverse Opposite:

p-value:1e-71
log p-value:-1.657e+02
Information Content per bp:1.721
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets103.1 +/- 57.7bp
Average Position of motif in Background130.5 +/- 50.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CCRGGCTCGC-
---GGCGCGCT

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCRGGCTCGC
ATGCCCGGGCATGT

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CCRGGCTCGC-
AGCAACAGCCGCACC

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCRGGCTCGC
CTAGGCCT--

PB0008.1_E2F2_1/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCRGGCTCGC---
ATAAAGGCGCGCGAT

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCRGGCTCGC
CNAGGCCT--

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCRGGCTCGC---
ATAAGGGCGCGCGAT

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCRGGCTCGC
CCAGACRSVB

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------CCRGGCTCGC
CATGGCCCCAGGGCA--

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCRGGCTCGC
ATGCCAGACN---